Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.4■□□□□ 0.38
RORAP35398 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.4■□□□□ 0.38
RORAP35398 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RORAP35398 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
RORAP35398 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RORAP35398 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RORAP35398 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
RORAP35398 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RORAP35398 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.39■□□□□ 0.37
RORAP35398 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.39■□□□□ 0.37
RORAP35398 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RORAP35398 AL163051.1-201ENST00000569214 1512 ntBASIC17.39■□□□□ 0.37
RORAP35398 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.39■□□□□ 0.37
RORAP35398 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 IGHGP-201ENST00000390555 1178 ntBASIC17.39■□□□□ 0.37
RORAP35398 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.39■□□□□ 0.37
RORAP35398 PRELID1P1-202ENST00000567272 903 ntBASIC17.39■□□□□ 0.37
RORAP35398 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 GPR32P1-201ENST00000601788 811 ntBASIC17.39■□□□□ 0.37
RORAP35398 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RORAP35398 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RORAP35398 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RORAP35398 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RORAP35398 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RORAP35398 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.39■□□□□ 0.37
RORAP35398 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.38■□□□□ 0.37
RORAP35398 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 KRT89P-201ENST00000620027 1478 ntBASIC17.38■□□□□ 0.37
RORAP35398 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.38■□□□□ 0.37
RORAP35398 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
RORAP35398 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RORAP35398 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.38■□□□□ 0.37
RORAP35398 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.38■□□□□ 0.37
RORAP35398 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.38■□□□□ 0.37
RORAP35398 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.38■□□□□ 0.37
RORAP35398 AC090616.6-201ENST00000582640 721 ntBASIC17.38■□□□□ 0.37
RORAP35398 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.38■□□□□ 0.37
RORAP35398 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.38■□□□□ 0.37
RORAP35398 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.38■□□□□ 0.37
RORAP35398 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.38■□□□□ 0.37
RORAP35398 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.38■□□□□ 0.37
RORAP35398 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RORAP35398 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RORAP35398 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.38■□□□□ 0.37
RORAP35398 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RORAP35398 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RORAP35398 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RORAP35398 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
RORAP35398 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RORAP35398 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.37■□□□□ 0.37
RORAP35398 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.37■□□□□ 0.37
RORAP35398 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RORAP35398 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.37■□□□□ 0.37
RORAP35398 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.37■□□□□ 0.37
RORAP35398 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.37■□□□□ 0.37
RORAP35398 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RORAP35398 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.37■□□□□ 0.37
RORAP35398 AL691432.3-201ENST00000621860 400 ntBASIC17.37■□□□□ 0.37
RORAP35398 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms