Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN7P35236 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN7P35236 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN7P35236 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN7P35236 MIR1238-201ENST00000408483 83 ntBASIC18.95■□□□□ 0.62
PTPN7P35236 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.95■□□□□ 0.62
PTPN7P35236 EGLN1P1-201ENST00000531623 762 ntBASIC18.95■□□□□ 0.62
PTPN7P35236 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN7P35236 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN7P35236 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.95■□□□□ 0.62
PTPN7P35236 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PTPN7P35236 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PTPN7P35236 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.95■□□□□ 0.62
PTPN7P35236 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 AP000997.3-201ENST00000623333 2250 ntBASIC18.94■□□□□ 0.62
PTPN7P35236 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PTPN7P35236 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PTPN7P35236 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.94■□□□□ 0.62
PTPN7P35236 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN7P35236 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN7P35236 AL355075.4-201ENST00000554988 638 ntBASIC18.94■□□□□ 0.62
PTPN7P35236 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN7P35236 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
PTPN7P35236 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.94■□□□□ 0.62
PTPN7P35236 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.94■□□□□ 0.62
PTPN7P35236 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.94■□□□□ 0.62
PTPN7P35236 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PTPN7P35236 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN7P35236 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PTPN7P35236 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PTPN7P35236 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.93■□□□□ 0.62
PTPN7P35236 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN7P35236 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.93■□□□□ 0.62
PTPN7P35236 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 LINC00896-202ENST00000609602 2128 ntBASIC18.93■□□□□ 0.62
PTPN7P35236 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 KRT18P55-202ENST00000578578 1546 ntBASIC18.93■□□□□ 0.62
PTPN7P35236 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PTPN7P35236 KRT17P2-201ENST00000300992 1314 ntBASIC18.93■□□□□ 0.62
PTPN7P35236 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PTPN7P35236 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN7P35236 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN7P35236 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN7P35236 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PTPN7P35236 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN7P35236 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.92■□□□□ 0.62
PTPN7P35236 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.92■□□□□ 0.62
PTPN7P35236 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PTPN7P35236 AC010240.3-201ENST00000607688 395 ntBASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms