Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.66■■□□□ 1.54
USP6P35125 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC24.66■■□□□ 1.54
USP6P35125 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.66■■□□□ 1.54
USP6P35125 AC025062.2-201ENST00000605477 670 ntBASIC24.66■■□□□ 1.54
USP6P35125 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
USP6P35125 AC116407.3-201ENST00000623905 1129 ntBASIC24.66■■□□□ 1.54
USP6P35125 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC24.66■■□□□ 1.54
USP6P35125 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP6P35125 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP6P35125 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
USP6P35125 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC24.65■■□□□ 1.54
USP6P35125 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 AC005082.1-201ENST00000413042 2259 ntBASIC24.65■■□□□ 1.54
USP6P35125 AC116562.4-201ENST00000641316 2276 ntBASIC24.65■■□□□ 1.54
USP6P35125 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
USP6P35125 AC112698.1-201ENST00000510299 916 ntBASIC24.65■■□□□ 1.54
USP6P35125 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC24.65■■□□□ 1.54
USP6P35125 PIN1-206ENST00000587625 878 ntTSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC24.65■■□□□ 1.54
USP6P35125 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC24.65■■□□□ 1.54
USP6P35125 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
USP6P35125 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC24.65■■□□□ 1.54
USP6P35125 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
USP6P35125 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP6P35125 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP6P35125 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC24.64■■□□□ 1.54
USP6P35125 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP6P35125 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP6P35125 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.64■■□□□ 1.54
USP6P35125 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC24.64■■□□□ 1.54
USP6P35125 RPL13AP23-201ENST00000480739 586 ntBASIC24.64■■□□□ 1.54
USP6P35125 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC24.64■■□□□ 1.54
USP6P35125 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC24.64■■□□□ 1.54
USP6P35125 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
USP6P35125 ANO7L1-203ENST00000602586 1720 ntBASIC24.64■■□□□ 1.54
USP6P35125 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
USP6P35125 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
USP6P35125 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC24.64■■□□□ 1.53
USP6P35125 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC24.63■■□□□ 1.53
USP6P35125 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC24.63■■□□□ 1.53
USP6P35125 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC24.63■■□□□ 1.53
USP6P35125 PNMT-203ENST00000581428 677 ntTSL 2 BASIC24.63■■□□□ 1.53
USP6P35125 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC24.63■■□□□ 1.53
USP6P35125 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC24.63■■□□□ 1.53
USP6P35125 AL139288.1-201ENST00000623748 933 ntBASIC24.63■■□□□ 1.53
USP6P35125 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC24.63■■□□□ 1.53
USP6P35125 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.63■■□□□ 1.53
USP6P35125 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC24.63■■□□□ 1.53
USP6P35125 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC24.63■■□□□ 1.53
USP6P35125 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
USP6P35125 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.62■■□□□ 1.53
USP6P35125 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
USP6P35125 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC24.62■■□□□ 1.53
USP6P35125 CTNS-203ENST00000399306 803 ntTSL 3 BASIC24.62■■□□□ 1.53
USP6P35125 RPS2P1-201ENST00000434010 821 ntBASIC24.62■■□□□ 1.53
USP6P35125 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
USP6P35125 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC24.62■■□□□ 1.53
USP6P35125 AC012640.2-201ENST00000561606 901 ntBASIC24.62■■□□□ 1.53
USP6P35125 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
USP6P35125 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
USP6P35125 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
USP6P35125 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
USP6P35125 AC132938.6-201ENST00000623828 1655 ntBASIC24.62■■□□□ 1.53
USP6P35125 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
USP6P35125 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
USP6P35125 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
USP6P35125 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC24.62■■□□□ 1.53
USP6P35125 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
USP6P35125 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC24.61■■□□□ 1.53
USP6P35125 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC24.61■■□□□ 1.53
USP6P35125 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC24.61■■□□□ 1.53
USP6P35125 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USP6P35125 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6P35125 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6P35125 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
USP6P35125 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC24.61■■□□□ 1.53
USP6P35125 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6P35125 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
USP6P35125 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC24.61■■□□□ 1.53
USP6P35125 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms