Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CKS2P33552 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CKS2P33552 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.49□□□□□ -0.25
CKS2P33552 GGT1-206ENST00000404223 952 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS2P33552 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS2P33552 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS2P33552 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CKS2P33552 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.49□□□□□ -0.25
CKS2P33552 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CKS2P33552 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS2P33552 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
CKS2P33552 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CKS2P33552 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.48□□□□□ -0.25
CKS2P33552 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CKS2P33552 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CKS2P33552 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC13.48□□□□□ -0.25
CKS2P33552 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.48□□□□□ -0.25
CKS2P33552 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 TSPY23P-201ENST00000440136 739 ntBASIC13.48□□□□□ -0.25
CKS2P33552 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC13.48□□□□□ -0.25
CKS2P33552 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.48□□□□□ -0.25
CKS2P33552 DUX4L16-201ENST00000555130 1264 ntBASIC13.48□□□□□ -0.25
CKS2P33552 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.48□□□□□ -0.25
CKS2P33552 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.48□□□□□ -0.25
CKS2P33552 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CKS2P33552 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.48□□□□□ -0.25
CKS2P33552 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.48□□□□□ -0.25
CKS2P33552 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CKS2P33552 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CKS2P33552 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.47□□□□□ -0.25
CKS2P33552 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CKS2P33552 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS2P33552 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS2P33552 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CKS2P33552 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CKS2P33552 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS2P33552 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS2P33552 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.47□□□□□ -0.25
CKS2P33552 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS2P33552 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS2P33552 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CKS2P33552 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC13.47□□□□□ -0.25
CKS2P33552 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CKS2P33552 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CKS2P33552 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CKS2P33552 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms