Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX1P22670 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX1P22670 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX1P22670 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.94■□□□□ 0.78
RFX1P22670 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFX1P22670 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX1P22670 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RFX1P22670 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX1P22670 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFX1P22670 NOC2LP1-202ENST00000452600 2235 ntBASIC19.94■□□□□ 0.78
RFX1P22670 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFX1P22670 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.93■□□□□ 0.78
RFX1P22670 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFX1P22670 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.93■□□□□ 0.78
RFX1P22670 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.93■□□□□ 0.78
RFX1P22670 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RFX1P22670 AC036111.1-201ENST00000533973 1582 ntBASIC19.93■□□□□ 0.78
RFX1P22670 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.93■□□□□ 0.78
RFX1P22670 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX1P22670 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.93■□□□□ 0.78
RFX1P22670 AC005332.1-201ENST00000577698 1310 ntBASIC19.93■□□□□ 0.78
RFX1P22670 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX1P22670 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.93■□□□□ 0.78
RFX1P22670 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RFX1P22670 AC092338.2-201ENST00000568827 1415 ntBASIC19.93■□□□□ 0.78
RFX1P22670 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
RFX1P22670 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX1P22670 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX1P22670 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.92■□□□□ 0.78
RFX1P22670 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 AP003041.3-201ENST00000527151 707 ntBASIC19.92■□□□□ 0.78
RFX1P22670 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.92■□□□□ 0.78
RFX1P22670 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.92■□□□□ 0.78
RFX1P22670 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
RFX1P22670 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
RFX1P22670 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RFX1P22670 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX1P22670 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RFX1P22670 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RFX1P22670 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RFX1P22670 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX1P22670 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX1P22670 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX1P22670 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.91■□□□□ 0.78
RFX1P22670 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.91■□□□□ 0.78
RFX1P22670 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RFX1P22670 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms