Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.66■□□□□ 0.42
CAPN3P20807 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 AC012313.1-201ENST00000593393 3059 ntBASIC17.66■□□□□ 0.42
CAPN3P20807 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CAPN3P20807 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.66■□□□□ 0.42
CAPN3P20807 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.66■□□□□ 0.42
CAPN3P20807 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
CAPN3P20807 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN3P20807 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CAPN3P20807 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN3P20807 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CAPN3P20807 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CAPN3P20807 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CAPN3P20807 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN3P20807 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.65■□□□□ 0.42
CAPN3P20807 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN3P20807 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.65■□□□□ 0.42
CAPN3P20807 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN3P20807 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.65■□□□□ 0.42
CAPN3P20807 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CAPN3P20807 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CAPN3P20807 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.65■□□□□ 0.42
CAPN3P20807 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CAPN3P20807 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CAPN3P20807 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN3P20807 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN3P20807 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.64■□□□□ 0.42
CAPN3P20807 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CAPN3P20807 AL096828.2-201ENST00000567259 1965 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN3P20807 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
CAPN3P20807 AC004951.3-201ENST00000418645 1148 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN3P20807 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN3P20807 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CAPN3P20807 CKBP1-201ENST00000565489 1086 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 AL353708.3-201ENST00000610272 989 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.64■□□□□ 0.41
CAPN3P20807 AC026471.5-201ENST00000615068 467 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 AC005363.2-201ENST00000618631 242 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.64■□□□□ 0.41
CAPN3P20807 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 AL109659.2-201ENST00000606809 1674 ntBASIC17.64■□□□□ 0.41
CAPN3P20807 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.64■□□□□ 0.41
CAPN3P20807 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CAPN3P20807 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CAPN3P20807 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN3P20807 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN3P20807 AL355355.2-201ENST00000442321 338 ntBASIC17.63■□□□□ 0.41
CAPN3P20807 AC008040.2-201ENST00000461049 708 ntBASIC17.63■□□□□ 0.41
CAPN3P20807 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.63■□□□□ 0.41
CAPN3P20807 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.63■□□□□ 0.41
CAPN3P20807 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CAPN3P20807 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms