Protein–RNA interactions for Protein: P18564

ITGB6, Integrin beta-6, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6P18564 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.28■□□□□ 0.52
ITGB6P18564 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.28■□□□□ 0.52
ITGB6P18564 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ITGB6P18564 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ITGB6P18564 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
ITGB6P18564 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.27■□□□□ 0.52
ITGB6P18564 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.27■□□□□ 0.52
ITGB6P18564 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.27■□□□□ 0.52
ITGB6P18564 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 AC026396.1-201ENST00000419388 421 ntBASIC18.27■□□□□ 0.52
ITGB6P18564 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 AC117947.1-201ENST00000427448 529 ntBASIC18.27■□□□□ 0.52
ITGB6P18564 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.27■□□□□ 0.52
ITGB6P18564 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.27■□□□□ 0.52
ITGB6P18564 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 AC024243.1-201ENST00000609234 778 ntBASIC18.27■□□□□ 0.52
ITGB6P18564 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.27■□□□□ 0.52
ITGB6P18564 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
ITGB6P18564 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
ITGB6P18564 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ITGB6P18564 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.27■□□□□ 0.51
ITGB6P18564 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ITGB6P18564 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ITGB6P18564 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.27■□□□□ 0.51
ITGB6P18564 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.27■□□□□ 0.51
ITGB6P18564 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.51
ITGB6P18564 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ITGB6P18564 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
ITGB6P18564 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ITGB6P18564 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
ITGB6P18564 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ITGB6P18564 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
ITGB6P18564 AC007613.1-201ENST00000572811 2597 ntBASIC18.26■□□□□ 0.51
ITGB6P18564 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.26■□□□□ 0.51
ITGB6P18564 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
ITGB6P18564 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
ITGB6P18564 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.26■□□□□ 0.51
ITGB6P18564 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.26■□□□□ 0.51
ITGB6P18564 AC112497.1-201ENST00000624824 639 ntBASIC18.26■□□□□ 0.51
ITGB6P18564 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ITGB6P18564 AC073592.3-201ENST00000625118 1834 ntBASIC18.26■□□□□ 0.51
ITGB6P18564 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ITGB6P18564 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
ITGB6P18564 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.25■□□□□ 0.51
ITGB6P18564 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.25■□□□□ 0.51
ITGB6P18564 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
ITGB6P18564 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.25■□□□□ 0.51
ITGB6P18564 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
ITGB6P18564 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.25■□□□□ 0.51
ITGB6P18564 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.25■□□□□ 0.51
ITGB6P18564 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
ITGB6P18564 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.25■□□□□ 0.51
ITGB6P18564 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.25■□□□□ 0.51
ITGB6P18564 AP000550.4-202ENST00000639755 178 ntBASIC18.25■□□□□ 0.51
ITGB6P18564 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.25■□□□□ 0.51
ITGB6P18564 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
ITGB6P18564 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.25■□□□□ 0.51
ITGB6P18564 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms