Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN1P18031 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN1P18031 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
PTPN1P18031 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN1P18031 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 GMCL1P1-201ENST00000463439 1581 ntBASIC19.36■□□□□ 0.69
PTPN1P18031 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN1P18031 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.36■□□□□ 0.69
PTPN1P18031 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.36■□□□□ 0.69
PTPN1P18031 TSSC2-201ENST00000450217 709 ntBASIC19.36■□□□□ 0.69
PTPN1P18031 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.36■□□□□ 0.69
PTPN1P18031 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPN1P18031 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN1P18031 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN1P18031 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN1P18031 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTPN1P18031 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN1P18031 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN1P18031 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.35■□□□□ 0.69
PTPN1P18031 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
PTPN1P18031 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN1P18031 AL353692.3-201ENST00000407031 1396 ntBASIC19.35■□□□□ 0.69
PTPN1P18031 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PTPN1P18031 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 AC113404.2-201ENST00000507884 177 ntBASIC19.35■□□□□ 0.69
PTPN1P18031 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN1P18031 AC004263.2-201ENST00000617183 678 ntBASIC19.35■□□□□ 0.69
PTPN1P18031 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN1P18031 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.35■□□□□ 0.69
PTPN1P18031 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN1P18031 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN1P18031 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.34■□□□□ 0.69
PTPN1P18031 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN1P18031 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN1P18031 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.34■□□□□ 0.69
PTPN1P18031 NPAP1P7-201ENST00000613027 823 ntBASIC19.34■□□□□ 0.69
PTPN1P18031 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.34■□□□□ 0.69
PTPN1P18031 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.34■□□□□ 0.69
PTPN1P18031 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTPN1P18031 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN1P18031 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN1P18031 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTPN1P18031 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.33■□□□□ 0.69
PTPN1P18031 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN1P18031 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN1P18031 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTPN1P18031 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN1P18031 CHCHD2P8-201ENST00000429873 447 ntBASIC19.33■□□□□ 0.68
PTPN1P18031 ATP5G2P1-201ENST00000433580 426 ntBASIC19.33■□□□□ 0.68
PTPN1P18031 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.33■□□□□ 0.68
PTPN1P18031 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.33■□□□□ 0.68
PTPN1P18031 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTPN1P18031 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.33■□□□□ 0.68
PTPN1P18031 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms