Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGA1P17096 REXO1L6P-202ENST00000619970 1078 ntBASIC18.95■□□□□ 0.62
HMGA1P17096 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA1P17096 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA1P17096 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA1P17096 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA1P17096 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.95■□□□□ 0.62
HMGA1P17096 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HMGA1P17096 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HMGA1P17096 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGA1P17096 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGA1P17096 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 AL121912.1-201ENST00000603683 238 ntBASIC18.94■□□□□ 0.62
HMGA1P17096 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGA1P17096 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.94■□□□□ 0.62
HMGA1P17096 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.94■□□□□ 0.62
HMGA1P17096 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
HMGA1P17096 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HMGA1P17096 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGA1P17096 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HMGA1P17096 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.93■□□□□ 0.62
HMGA1P17096 KRT18P65-201ENST00000439811 1286 ntBASIC18.93■□□□□ 0.62
HMGA1P17096 AF238378.1-201ENST00000526806 358 ntBASIC18.93■□□□□ 0.62
HMGA1P17096 AP002469.2-201ENST00000531724 424 ntBASIC18.93■□□□□ 0.62
HMGA1P17096 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.93■□□□□ 0.62
HMGA1P17096 AC114341.1-201ENST00000618070 349 ntBASIC18.93■□□□□ 0.62
HMGA1P17096 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 GMCL1P1-201ENST00000463439 1581 ntBASIC18.93■□□□□ 0.62
HMGA1P17096 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HMGA1P17096 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA1P17096 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
HMGA1P17096 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.92■□□□□ 0.62
HMGA1P17096 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
HMGA1P17096 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA1P17096 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.92■□□□□ 0.62
HMGA1P17096 SAPCD2P3-201ENST00000455031 850 ntBASIC18.92■□□□□ 0.62
HMGA1P17096 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA1P17096 AC096582.2-201ENST00000510860 516 ntBASIC18.92■□□□□ 0.62
HMGA1P17096 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.92■□□□□ 0.62
HMGA1P17096 AL591684.3-201ENST00000605187 298 ntBASIC18.92■□□□□ 0.62
HMGA1P17096 AL138831.2-201ENST00000606564 490 ntBASIC18.92■□□□□ 0.62
HMGA1P17096 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA1P17096 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA1P17096 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.92■□□□□ 0.62
HMGA1P17096 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
HMGA1P17096 ESPNP-201ENST00000270691 2015 ntBASIC18.91■□□□□ 0.62
HMGA1P17096 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.91■□□□□ 0.62
HMGA1P17096 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
HMGA1P17096 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.91■□□□□ 0.62
HMGA1P17096 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
HMGA1P17096 RCN1P2-201ENST00000398357 915 ntBASIC18.91■□□□□ 0.62
HMGA1P17096 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.91■□□□□ 0.62
HMGA1P17096 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.91■□□□□ 0.62
HMGA1P17096 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.91■□□□□ 0.62
HMGA1P17096 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.91■□□□□ 0.62
HMGA1P17096 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms