Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MIR1199-201ENST00000621445 119 ntBASIC31.22■■■□□ 2.59
CFTRP13569 ORC5-208ENST00000626700 344 ntTSL 3 BASIC31.22■■■□□ 2.59
CFTRP13569 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC31.22■■■□□ 2.59
CFTRP13569 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC31.22■■■□□ 2.59
CFTRP13569 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
CFTRP13569 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC31.22■■■□□ 2.59
CFTRP13569 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC31.22■■■□□ 2.59
CFTRP13569 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC31.21■■■□□ 2.59
CFTRP13569 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CFTRP13569 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC31.21■■■□□ 2.59
CFTRP13569 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC31.21■■■□□ 2.59
CFTRP13569 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC31.21■■■□□ 2.59
CFTRP13569 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC31.21■■■□□ 2.59
CFTRP13569 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC31.21■■■□□ 2.59
CFTRP13569 AD001527.2-201ENST00000622994 785 ntBASIC31.21■■■□□ 2.59
CFTRP13569 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC31.21■■■□□ 2.59
CFTRP13569 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC31.21■■■□□ 2.59
CFTRP13569 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC31.21■■■□□ 2.59
CFTRP13569 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC31.21■■■□□ 2.59
CFTRP13569 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC31.21■■■□□ 2.59
CFTRP13569 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC31.21■■■□□ 2.59
CFTRP13569 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CFTRP13569 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC31.21■■■□□ 2.59
CFTRP13569 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC31.21■■■□□ 2.59
CFTRP13569 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFTRP13569 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.59
CFTRP13569 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFTRP13569 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CFTRP13569 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFTRP13569 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
CFTRP13569 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC31.2■■■□□ 2.58
CFTRP13569 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CFTRP13569 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CFTRP13569 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CFTRP13569 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
CFTRP13569 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
CFTRP13569 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC31.2■■■□□ 2.58
CFTRP13569 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC31.2■■■□□ 2.58
CFTRP13569 AC092865.6-201ENST00000642101 219 ntBASIC31.2■■■□□ 2.58
CFTRP13569 MYLKP1-201ENST00000509077 1580 ntBASIC31.2■■■□□ 2.58
CFTRP13569 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC31.19■■■□□ 2.58
CFTRP13569 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC31.19■■■□□ 2.58
CFTRP13569 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC31.19■■■□□ 2.58
CFTRP13569 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CFTRP13569 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC31.19■■■□□ 2.58
CFTRP13569 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC31.19■■■□□ 2.58
CFTRP13569 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC31.19■■■□□ 2.58
CFTRP13569 AC005593.1-201ENST00000624894 515 ntBASIC31.19■■■□□ 2.58
CFTRP13569 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC31.19■■■□□ 2.58
CFTRP13569 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
CFTRP13569 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC31.18■■■□□ 2.58
CFTRP13569 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC31.18■■■□□ 2.58
CFTRP13569 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC31.18■■■□□ 2.58
CFTRP13569 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 ADK-206ENST00000541550 2222 ntTSL 2 BASIC31.18■■■□□ 2.58
CFTRP13569 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC31.18■■■□□ 2.58
CFTRP13569 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 AL035633.1-201ENST00000406139 838 ntBASIC31.18■■■□□ 2.58
CFTRP13569 ELK2BP-201ENST00000415014 1224 ntBASIC31.18■■■□□ 2.58
CFTRP13569 PRYP5-201ENST00000451909 266 ntBASIC31.18■■■□□ 2.58
CFTRP13569 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC31.18■■■□□ 2.58
CFTRP13569 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CFTRP13569 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC31.18■■■□□ 2.58
CFTRP13569 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
CFTRP13569 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
CFTRP13569 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC31.17■■■□□ 2.58
CFTRP13569 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC31.17■■■□□ 2.58
CFTRP13569 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC31.17■■■□□ 2.58
CFTRP13569 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC31.17■■■□□ 2.58
CFTRP13569 C20orf181-201ENST00000623918 480 ntBASIC31.17■■■□□ 2.58
CFTRP13569 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms