Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
HTR1AP08908 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
HTR1AP08908 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.73■□□□□ 0.27
HTR1AP08908 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HTR1AP08908 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.73■□□□□ 0.27
HTR1AP08908 CROCCP5-201ENST00000436658 830 ntBASIC16.73■□□□□ 0.27
HTR1AP08908 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 AC097658.1-201ENST00000475555 843 ntBASIC16.73■□□□□ 0.27
HTR1AP08908 PNMA6B-201ENST00000538162 1200 ntBASIC16.73■□□□□ 0.27
HTR1AP08908 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.73■□□□□ 0.27
HTR1AP08908 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 AC120498.8-201ENST00000614275 531 ntBASIC16.73■□□□□ 0.27
HTR1AP08908 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.73■□□□□ 0.27
HTR1AP08908 AL121761.2-201ENST00000598007 1648 ntBASIC16.73■□□□□ 0.27
HTR1AP08908 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HTR1AP08908 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
HTR1AP08908 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.73■□□□□ 0.27
HTR1AP08908 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.72■□□□□ 0.27
HTR1AP08908 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.72■□□□□ 0.27
HTR1AP08908 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 AC006970.2-201ENST00000450065 779 ntBASIC16.72■□□□□ 0.27
HTR1AP08908 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.72■□□□□ 0.27
HTR1AP08908 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.72■□□□□ 0.27
HTR1AP08908 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.72■□□□□ 0.27
HTR1AP08908 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.72■□□□□ 0.27
HTR1AP08908 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.72■□□□□ 0.27
HTR1AP08908 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.72■□□□□ 0.27
HTR1AP08908 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.72■□□□□ 0.27
HTR1AP08908 AL137784.2-201ENST00000607332 1000 ntBASIC16.72■□□□□ 0.27
HTR1AP08908 IKBKGP1-201ENST00000612193 1073 ntBASIC16.72■□□□□ 0.27
HTR1AP08908 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HTR1AP08908 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
HTR1AP08908 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HTR1AP08908 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
HTR1AP08908 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.71■□□□□ 0.27
HTR1AP08908 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HTR1AP08908 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HTR1AP08908 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HTR1AP08908 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HTR1AP08908 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.71■□□□□ 0.27
HTR1AP08908 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms