Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 AC108860.2-201ENST00000562760 2183 ntBASIC13.97□□□□□ -0.17
TCRAP04437 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.97□□□□□ -0.17
TCRAP04437 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.97□□□□□ -0.17
TCRAP04437 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.97□□□□□ -0.17
TCRAP04437 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TCRAP04437 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
TCRAP04437 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRAP04437 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRAP04437 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRAP04437 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TCRAP04437 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 ENSA-205ENST00000361532 792 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRAP04437 AP000593.1-201ENST00000393668 712 ntBASIC13.96□□□□□ -0.17
TCRAP04437 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRAP04437 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRAP04437 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TCRAP04437 NCF1B-203ENST00000435988 1254 ntBASIC13.96□□□□□ -0.17
TCRAP04437 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRAP04437 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
TCRAP04437 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRAP04437 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC13.96□□□□□ -0.17
TCRAP04437 AC131212.4-201ENST00000623606 975 ntBASIC13.96□□□□□ -0.17
TCRAP04437 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TCRAP04437 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.96□□□□□ -0.17
TCRAP04437 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC13.96□□□□□ -0.17
TCRAP04437 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TCRAP04437 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRAP04437 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRAP04437 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TCRAP04437 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRAP04437 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.96□□□□□ -0.18
TCRAP04437 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.96□□□□□ -0.18
TCRAP04437 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TCRAP04437 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 AL109659.2-201ENST00000606809 1674 ntBASIC13.95□□□□□ -0.18
TCRAP04437 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.95□□□□□ -0.18
TCRAP04437 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 PPP1R14BP3-201ENST00000509033 445 ntBASIC13.95□□□□□ -0.18
TCRAP04437 DLX3-202ENST00000512495 834 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 AL138781.1-201ENST00000566567 1274 ntBASIC13.95□□□□□ -0.18
TCRAP04437 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.95□□□□□ -0.18
TCRAP04437 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 AL445675.2-201ENST00000620291 557 ntBASIC13.95□□□□□ -0.18
TCRAP04437 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 PHGDH-209ENST00000641074 1780 ntBASIC13.95□□□□□ -0.18
TCRAP04437 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TCRAP04437 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.95□□□□□ -0.18
TCRAP04437 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TCRAP04437 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms