Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.03■□□□□ 0.8
VTNP04004 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.03■□□□□ 0.8
VTNP04004 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
VTNP04004 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
VTNP04004 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.03■□□□□ 0.8
VTNP04004 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
VTNP04004 NUS1P2-201ENST00000417358 873 ntBASIC20.03■□□□□ 0.8
VTNP04004 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.03■□□□□ 0.8
VTNP04004 MINOS1P3-201ENST00000457048 203 ntBASIC20.03■□□□□ 0.8
VTNP04004 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.03■□□□□ 0.8
VTNP04004 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.03■□□□□ 0.8
VTNP04004 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.03■□□□□ 0.8
VTNP04004 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 GXYLT1P4-201ENST00000613576 1192 ntBASIC20.03■□□□□ 0.8
VTNP04004 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
VTNP04004 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
VTNP04004 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
VTNP04004 LINC00602-201ENST00000629776 2065 ntBASIC20.03■□□□□ 0.8
VTNP04004 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.02■□□□□ 0.8
VTNP04004 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.02■□□□□ 0.8
VTNP04004 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 AC126763.1-201ENST00000552015 2118 ntBASIC20.02■□□□□ 0.8
VTNP04004 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
VTNP04004 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 FAAHP1-202ENST00000446499 1238 ntBASIC20.02■□□□□ 0.8
VTNP04004 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.02■□□□□ 0.8
VTNP04004 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
VTNP04004 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.02■□□□□ 0.8
VTNP04004 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.02■□□□□ 0.8
VTNP04004 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 AL031008.1-201ENST00000619963 541 ntBASIC20.02■□□□□ 0.8
VTNP04004 AL031598.1-201ENST00000561511 1773 ntBASIC20.02■□□□□ 0.8
VTNP04004 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
VTNP04004 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.02■□□□□ 0.8
VTNP04004 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
VTNP04004 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.01■□□□□ 0.79
VTNP04004 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.01■□□□□ 0.79
VTNP04004 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.01■□□□□ 0.79
VTNP04004 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.01■□□□□ 0.79
VTNP04004 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.01■□□□□ 0.79
VTNP04004 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 AC079781.3-201ENST00000449110 356 ntBASIC20.01■□□□□ 0.79
VTNP04004 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.01■□□□□ 0.79
VTNP04004 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.01■□□□□ 0.79
VTNP04004 LINC01711-201ENST00000598340 967 ntBASIC20.01■□□□□ 0.79
VTNP04004 AL353801.3-201ENST00000609898 542 ntBASIC20.01■□□□□ 0.79
VTNP04004 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.01■□□□□ 0.79
VTNP04004 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
VTNP04004 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.01■□□□□ 0.79
VTNP04004 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
VTNP04004 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
VTNP04004 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20■□□□□ 0.79
VTNP04004 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
VTNP04004 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20■□□□□ 0.79
VTNP04004 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20■□□□□ 0.79
VTNP04004 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20■□□□□ 0.79
VTNP04004 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20■□□□□ 0.79
VTNP04004 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20■□□□□ 0.79
VTNP04004 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20■□□□□ 0.79
VTNP04004 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20■□□□□ 0.79
VTNP04004 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20■□□□□ 0.79
VTNP04004 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20■□□□□ 0.79
VTNP04004 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.99■□□□□ 0.79
VTNP04004 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
VTNP04004 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
VTNP04004 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms