Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 HOXB1-202ENST00000577092 1414 ntBASIC17.77■□□□□ 0.44
KRT6AP02538 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
KRT6AP02538 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT6AP02538 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT6AP02538 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
KRT6AP02538 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.77■□□□□ 0.43
KRT6AP02538 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.77■□□□□ 0.43
KRT6AP02538 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
KRT6AP02538 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KRT6AP02538 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
KRT6AP02538 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT6AP02538 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT6AP02538 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
KRT6AP02538 TSPY7P-201ENST00000431358 1114 ntBASIC17.76■□□□□ 0.43
KRT6AP02538 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT6AP02538 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
KRT6AP02538 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.76■□□□□ 0.43
KRT6AP02538 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 AP006294.2-201ENST00000641667 209 ntBASIC17.76■□□□□ 0.43
KRT6AP02538 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 AL163051.1-201ENST00000569214 1512 ntBASIC17.76■□□□□ 0.43
KRT6AP02538 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.76■□□□□ 0.43
KRT6AP02538 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
KRT6AP02538 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
KRT6AP02538 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6AP02538 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT6AP02538 KRT18P23-201ENST00000435622 1283 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6AP02538 BX088651.1-201ENST00000540551 451 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 FITM1-202ENST00000559294 800 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6AP02538 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.75■□□□□ 0.43
KRT6AP02538 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.75■□□□□ 0.43
KRT6AP02538 TMEM191A-211ENST00000637163 1067 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 AC116562.4-202ENST00000641738 218 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 AC068880.1-201ENST00000507289 2297 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
KRT6AP02538 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
KRT6AP02538 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
KRT6AP02538 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.75■□□□□ 0.43
KRT6AP02538 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
KRT6AP02538 AC138028.4-201ENST00000564984 1845 ntBASIC17.75■□□□□ 0.43
KRT6AP02538 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
KRT6AP02538 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 KRT17P2-201ENST00000300992 1314 ntBASIC17.74■□□□□ 0.43
KRT6AP02538 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
KRT6AP02538 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 REXO1L9P-201ENST00000604264 2108 ntBASIC17.74■□□□□ 0.43
KRT6AP02538 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT6AP02538 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.74■□□□□ 0.43
KRT6AP02538 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
KRT6AP02538 MIR149-201ENST00000384879 89 ntBASIC17.74■□□□□ 0.43
KRT6AP02538 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
KRT6AP02538 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms