Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFNB1P01574 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.99■□□□□ 0.63
IFNB1P01574 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.99■□□□□ 0.63
IFNB1P01574 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.99■□□□□ 0.63
IFNB1P01574 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.99■□□□□ 0.63
IFNB1P01574 AP001412.1-201ENST00000608405 714 ntBASIC18.99■□□□□ 0.63
IFNB1P01574 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFNB1P01574 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IFNB1P01574 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.99■□□□□ 0.63
IFNB1P01574 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
IFNB1P01574 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.99■□□□□ 0.63
IFNB1P01574 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
IFNB1P01574 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFNB1P01574 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.99■□□□□ 0.63
IFNB1P01574 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
IFNB1P01574 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.99■□□□□ 0.63
IFNB1P01574 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.99■□□□□ 0.63
IFNB1P01574 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IFNB1P01574 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.98■□□□□ 0.63
IFNB1P01574 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
IFNB1P01574 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
IFNB1P01574 LTB4R2-202ENST00000528054 3092 ntBASIC18.98■□□□□ 0.63
IFNB1P01574 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.98■□□□□ 0.63
IFNB1P01574 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.98■□□□□ 0.63
IFNB1P01574 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
IFNB1P01574 AP000593.1-201ENST00000393668 712 ntBASIC18.98■□□□□ 0.63
IFNB1P01574 AL355355.2-201ENST00000442321 338 ntBASIC18.98■□□□□ 0.63
IFNB1P01574 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.98■□□□□ 0.63
IFNB1P01574 REXO1L10P-201ENST00000615707 1290 ntBASIC18.98■□□□□ 0.63
IFNB1P01574 REXO1L12P-201ENST00000622156 912 ntBASIC18.98■□□□□ 0.63
IFNB1P01574 AL049637.2-201ENST00000641778 930 ntBASIC18.98■□□□□ 0.63
IFNB1P01574 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
IFNB1P01574 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.98■□□□□ 0.63
IFNB1P01574 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.98■□□□□ 0.63
IFNB1P01574 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.98■□□□□ 0.63
IFNB1P01574 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.98■□□□□ 0.63
IFNB1P01574 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IFNB1P01574 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.97■□□□□ 0.63
IFNB1P01574 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.97■□□□□ 0.63
IFNB1P01574 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 AC012618.2-201ENST00000428058 849 ntBASIC18.97■□□□□ 0.63
IFNB1P01574 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 AC233702.5-201ENST00000584107 538 ntBASIC18.97■□□□□ 0.63
IFNB1P01574 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
IFNB1P01574 AC138028.4-201ENST00000564984 1845 ntBASIC18.97■□□□□ 0.63
IFNB1P01574 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
IFNB1P01574 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
IFNB1P01574 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IFNB1P01574 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
IFNB1P01574 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 KRT8P50-201ENST00000562022 1438 ntBASIC18.96■□□□□ 0.63
IFNB1P01574 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.96■□□□□ 0.63
IFNB1P01574 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
IFNB1P01574 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.96■□□□□ 0.63
IFNB1P01574 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
IFNB1P01574 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms