Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC23.34■■□□□ 1.33
APBA3O96018 HEIH-201ENST00000623091 1652 ntBASIC23.34■■□□□ 1.33
APBA3O96018 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
APBA3O96018 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
APBA3O96018 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
APBA3O96018 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 AC099778.1-201ENST00000568593 1911 ntBASIC23.33■■□□□ 1.33
APBA3O96018 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC23.33■■□□□ 1.33
APBA3O96018 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC23.33■■□□□ 1.33
APBA3O96018 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC23.33■■□□□ 1.33
APBA3O96018 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC23.33■■□□□ 1.33
APBA3O96018 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC23.33■■□□□ 1.33
APBA3O96018 AC015922.1-201ENST00000421102 1152 ntBASIC23.33■■□□□ 1.33
APBA3O96018 VN2R19P-201ENST00000442399 1052 ntBASIC23.33■■□□□ 1.33
APBA3O96018 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
APBA3O96018 AC069262.1-201ENST00000539058 672 ntBASIC23.33■■□□□ 1.33
APBA3O96018 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC23.33■■□□□ 1.33
APBA3O96018 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC23.33■■□□□ 1.33
APBA3O96018 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC23.33■■□□□ 1.33
APBA3O96018 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC23.33■■□□□ 1.32
APBA3O96018 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
APBA3O96018 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC23.33■■□□□ 1.32
APBA3O96018 IRX1P1-201ENST00000438849 1838 ntBASIC23.33■■□□□ 1.32
APBA3O96018 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
APBA3O96018 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
APBA3O96018 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.32■■□□□ 1.32
APBA3O96018 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 COPE-202ENST00000349893 948 ntTSL 2 BASIC23.32■■□□□ 1.32
APBA3O96018 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC23.32■■□□□ 1.32
APBA3O96018 MIR149-201ENST00000384879 89 ntBASIC23.32■■□□□ 1.32
APBA3O96018 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
APBA3O96018 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 MIR4751-201ENST00000578027 74 ntBASIC23.32■■□□□ 1.32
APBA3O96018 LSM12-202ENST00000585388 942 ntTSL 3 BASIC23.32■■□□□ 1.32
APBA3O96018 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.32■■□□□ 1.32
APBA3O96018 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
APBA3O96018 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.32■■□□□ 1.32
APBA3O96018 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 ASL-204ENST00000395331 1538 ntTSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
APBA3O96018 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC23.32■■□□□ 1.32
APBA3O96018 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
APBA3O96018 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.32■■□□□ 1.32
APBA3O96018 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.31■■□□□ 1.32
APBA3O96018 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC23.31■■□□□ 1.32
APBA3O96018 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC23.31■■□□□ 1.32
APBA3O96018 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 HCG4B-203ENST00000450128 991 ntBASIC23.31■■□□□ 1.32
APBA3O96018 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.31■■□□□ 1.32
APBA3O96018 AP000344.2-201ENST00000512987 629 ntBASIC23.31■■□□□ 1.32
APBA3O96018 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC23.31■■□□□ 1.32
APBA3O96018 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC23.31■■□□□ 1.32
APBA3O96018 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
APBA3O96018 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
APBA3O96018 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
APBA3O96018 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
APBA3O96018 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
APBA3O96018 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
APBA3O96018 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.3■■□□□ 1.32
APBA3O96018 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.3■■□□□ 1.32
APBA3O96018 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.3■■□□□ 1.32
APBA3O96018 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
APBA3O96018 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.3■■□□□ 1.32
APBA3O96018 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
APBA3O96018 AC099343.3-201ENST00000605834 2503 ntBASIC23.29■■□□□ 1.32
APBA3O96018 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
APBA3O96018 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
APBA3O96018 KLK8-202ENST00000320838 456 ntTSL 5 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms