Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLDN1O95832 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CLDN1O95832 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.35■□□□□ 0.21
CLDN1O95832 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLDN1O95832 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN1O95832 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CLDN1O95832 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.34■□□□□ 0.21
CLDN1O95832 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN1O95832 AC098831.1-202ENST00000438821 336 ntBASIC16.34■□□□□ 0.21
CLDN1O95832 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN1O95832 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN1O95832 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 AP001160.2-201ENST00000596071 487 ntBASIC16.34■□□□□ 0.21
CLDN1O95832 GPR32P1-201ENST00000601788 811 ntBASIC16.34■□□□□ 0.21
CLDN1O95832 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.34■□□□□ 0.21
CLDN1O95832 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLDN1O95832 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLDN1O95832 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
CLDN1O95832 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.34■□□□□ 0.21
CLDN1O95832 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CLDN1O95832 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLDN1O95832 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CLDN1O95832 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN1O95832 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN1O95832 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLDN1O95832 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.33■□□□□ 0.21
CLDN1O95832 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
CLDN1O95832 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN1O95832 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 AC018712.1-201ENST00000455767 687 ntBASIC16.33■□□□□ 0.2
CLDN1O95832 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN1O95832 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.33■□□□□ 0.2
CLDN1O95832 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN1O95832 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CLDN1O95832 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CLDN1O95832 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.33■□□□□ 0.2
CLDN1O95832 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.33■□□□□ 0.2
CLDN1O95832 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
CLDN1O95832 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CLDN1O95832 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN1O95832 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN1O95832 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN1O95832 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms