Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP1O94782 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
USP1O94782 GMCL1P1-201ENST00000463439 1581 ntBASIC18.55■□□□□ 0.56
USP1O94782 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
USP1O94782 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
USP1O94782 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.54■□□□□ 0.56
USP1O94782 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.54■□□□□ 0.56
USP1O94782 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
USP1O94782 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
USP1O94782 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP1O94782 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 AC138028.4-201ENST00000564984 1845 ntBASIC18.54■□□□□ 0.56
USP1O94782 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.54■□□□□ 0.56
USP1O94782 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.54■□□□□ 0.56
USP1O94782 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 RBM17P1-201ENST00000453646 1190 ntBASIC18.54■□□□□ 0.56
USP1O94782 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.54■□□□□ 0.56
USP1O94782 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.54■□□□□ 0.56
USP1O94782 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 HOXB1-202ENST00000577092 1414 ntBASIC18.54■□□□□ 0.56
USP1O94782 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP1O94782 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
USP1O94782 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
USP1O94782 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.54■□□□□ 0.56
USP1O94782 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.54■□□□□ 0.56
USP1O94782 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.54■□□□□ 0.56
USP1O94782 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
USP1O94782 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.54■□□□□ 0.56
USP1O94782 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
USP1O94782 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.53■□□□□ 0.56
USP1O94782 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.53■□□□□ 0.56
USP1O94782 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.53■□□□□ 0.56
USP1O94782 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.53■□□□□ 0.56
USP1O94782 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.53■□□□□ 0.56
USP1O94782 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.53■□□□□ 0.56
USP1O94782 TSPY17P-201ENST00000450329 467 ntBASIC18.53■□□□□ 0.56
USP1O94782 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.53■□□□□ 0.56
USP1O94782 AP003041.3-201ENST00000527151 707 ntBASIC18.53■□□□□ 0.56
USP1O94782 KRT8P7-201ENST00000533003 1432 ntBASIC18.53■□□□□ 0.56
USP1O94782 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
USP1O94782 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
USP1O94782 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.53■□□□□ 0.56
USP1O94782 AL163051.1-201ENST00000569214 1512 ntBASIC18.53■□□□□ 0.56
USP1O94782 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
USP1O94782 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 KRT17P2-201ENST00000300992 1314 ntBASIC18.52■□□□□ 0.56
USP1O94782 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 REXO1L9P-201ENST00000604264 2108 ntBASIC18.52■□□□□ 0.56
USP1O94782 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.52■□□□□ 0.56
USP1O94782 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.52■□□□□ 0.56
USP1O94782 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
USP1O94782 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
USP1O94782 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.52■□□□□ 0.56
USP1O94782 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.52■□□□□ 0.56
USP1O94782 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.52■□□□□ 0.56
USP1O94782 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
USP1O94782 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.52■□□□□ 0.56
USP1O94782 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
USP1O94782 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
USP1O94782 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP1O94782 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.52■□□□□ 0.55
USP1O94782 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP1O94782 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP1O94782 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
USP1O94782 AC099398.1-201ENST00000567919 2776 ntBASIC18.52■□□□□ 0.55
USP1O94782 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP1O94782 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
USP1O94782 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
USP1O94782 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms