Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF253O75346 POU5F1P3-201ENST00000428824 1078 ntBASIC14.29□□□□□ -0.12
ZNF253O75346 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF253O75346 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF253O75346 PRSS44-201ENST00000515154 1146 ntBASIC14.29□□□□□ -0.12
ZNF253O75346 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF253O75346 UNC93B5-201ENST00000530315 699 ntBASIC14.29□□□□□ -0.12
ZNF253O75346 AC098934.4-201ENST00000564127 592 ntBASIC14.29□□□□□ -0.12
ZNF253O75346 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF253O75346 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.29□□□□□ -0.12
ZNF253O75346 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF253O75346 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
ZNF253O75346 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZNF253O75346 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
ZNF253O75346 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF253O75346 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF253O75346 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF253O75346 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF253O75346 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF253O75346 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF253O75346 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF253O75346 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF253O75346 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF253O75346 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF253O75346 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF253O75346 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF253O75346 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 AL109923.1-201ENST00000618799 583 ntBASIC14.28□□□□□ -0.12
ZNF253O75346 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ZNF253O75346 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF253O75346 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF253O75346 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
ZNF253O75346 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF253O75346 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF253O75346 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
ZNF253O75346 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF253O75346 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF253O75346 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
ZNF253O75346 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.27□□□□□ -0.12
ZNF253O75346 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
ZNF253O75346 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
ZNF253O75346 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF253O75346 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.27□□□□□ -0.12
ZNF253O75346 KRT8P3-201ENST00000519669 1449 ntBASIC14.27□□□□□ -0.12
ZNF253O75346 AC112777.1-201ENST00000540175 1423 ntBASIC14.27□□□□□ -0.12
ZNF253O75346 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.27□□□□□ -0.12
ZNF253O75346 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ZNF253O75346 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms