Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AP000997.3-201ENST00000623333 2250 ntBASIC20.56■□□□□ 0.88
ACTN4O43707 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 AC134043.2-201ENST00000624206 2238 ntBASIC20.56■□□□□ 0.88
ACTN4O43707 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.56■□□□□ 0.88
ACTN4O43707 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.56■□□□□ 0.88
ACTN4O43707 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.56■□□□□ 0.88
ACTN4O43707 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ACTN4O43707 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
ACTN4O43707 AL024508.2-201ENST00000607749 1894 ntBASIC20.56■□□□□ 0.88
ACTN4O43707 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ACTN4O43707 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.55■□□□□ 0.88
ACTN4O43707 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.55■□□□□ 0.88
ACTN4O43707 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
ACTN4O43707 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.55■□□□□ 0.88
ACTN4O43707 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.55■□□□□ 0.88
ACTN4O43707 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.55■□□□□ 0.88
ACTN4O43707 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.55■□□□□ 0.88
ACTN4O43707 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.55■□□□□ 0.88
ACTN4O43707 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ACTN4O43707 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 AC093010.1-201ENST00000473625 1624 ntBASIC20.55■□□□□ 0.88
ACTN4O43707 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ACTN4O43707 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.55■□□□□ 0.88
ACTN4O43707 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ACTN4O43707 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ACTN4O43707 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ACTN4O43707 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ACTN4O43707 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.54■□□□□ 0.88
ACTN4O43707 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
ACTN4O43707 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ACTN4O43707 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ACTN4O43707 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ACTN4O43707 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 AC020763.4-201ENST00000623414 4170 ntBASIC20.53■□□□□ 0.88
ACTN4O43707 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 MIR3180-4-201ENST00000582223 153 ntBASIC20.53■□□□□ 0.88
ACTN4O43707 FAM87A-204ENST00000613235 858 ntBASIC20.53■□□□□ 0.88
ACTN4O43707 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.53■□□□□ 0.88
ACTN4O43707 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ACTN4O43707 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ACTN4O43707 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ACTN4O43707 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
ACTN4O43707 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTN4O43707 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ACTN4O43707 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.52■□□□□ 0.88
ACTN4O43707 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
ACTN4O43707 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ACTN4O43707 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
ACTN4O43707 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.52■□□□□ 0.88
ACTN4O43707 SEC1P-202ENST00000473944 940 ntBASIC20.52■□□□□ 0.88
ACTN4O43707 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms