Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.25■□□□□ 0.51
PHGDHO43175 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.25■□□□□ 0.51
PHGDHO43175 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.25■□□□□ 0.51
PHGDHO43175 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PHGDHO43175 AP000997.3-201ENST00000623333 2250 ntBASIC18.25■□□□□ 0.51
PHGDHO43175 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PHGDHO43175 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PHGDHO43175 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.24■□□□□ 0.51
PHGDHO43175 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.24■□□□□ 0.51
PHGDHO43175 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 AP005242.2-201ENST00000580065 1175 ntBASIC18.24■□□□□ 0.51
PHGDHO43175 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.24■□□□□ 0.51
PHGDHO43175 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PHGDHO43175 PHGDH-209ENST00000641074 1780 ntBASIC18.24■□□□□ 0.51
PHGDHO43175 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PHGDHO43175 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
PHGDHO43175 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
PHGDHO43175 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PHGDHO43175 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.23■□□□□ 0.51
PHGDHO43175 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
PHGDHO43175 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.23■□□□□ 0.51
PHGDHO43175 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.23■□□□□ 0.51
PHGDHO43175 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PHGDHO43175 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PHGDHO43175 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.23■□□□□ 0.51
PHGDHO43175 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.23■□□□□ 0.51
PHGDHO43175 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.23■□□□□ 0.51
PHGDHO43175 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.23■□□□□ 0.51
PHGDHO43175 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.23■□□□□ 0.51
PHGDHO43175 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.23■□□□□ 0.51
PHGDHO43175 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.23■□□□□ 0.51
PHGDHO43175 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.23■□□□□ 0.51
PHGDHO43175 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 SDHAP2-201ENST00000455183 2001 ntBASIC18.23■□□□□ 0.51
PHGDHO43175 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PHGDHO43175 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
PHGDHO43175 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PHGDHO43175 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PHGDHO43175 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PHGDHO43175 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PHGDHO43175 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
PHGDHO43175 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms