Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
CLDN4O14493 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CLDN4O14493 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN4O14493 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN4O14493 HBZP1-201ENST00000354915 429 ntBASIC17.25■□□□□ 0.35
CLDN4O14493 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN4O14493 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN4O14493 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLDN4O14493 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN4O14493 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLDN4O14493 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN4O14493 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.25■□□□□ 0.35
CLDN4O14493 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.25■□□□□ 0.35
CLDN4O14493 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLDN4O14493 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CLDN4O14493 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN4O14493 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 ARMC10P1-201ENST00000313754 855 ntBASIC17.24■□□□□ 0.35
CLDN4O14493 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.24■□□□□ 0.35
CLDN4O14493 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN4O14493 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN4O14493 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN4O14493 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.24■□□□□ 0.35
CLDN4O14493 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CLDN4O14493 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN4O14493 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CLDN4O14493 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
CLDN4O14493 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
CLDN4O14493 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CLDN4O14493 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 GMCL1P1-201ENST00000463439 1581 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 AC005082.1-201ENST00000413042 2259 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN4O14493 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.23■□□□□ 0.35
CLDN4O14493 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
CLDN4O14493 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CLDN4O14493 HLA-F-220ENST00000434407 884 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 AC092597.1-201ENST00000487352 616 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 KRT18P35-201ENST00000510488 1269 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 ZNF444P1-201ENST00000559497 298 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CLDN4O14493 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 AC079602.3-201ENST00000623931 403 ntBASIC17.23■□□□□ 0.35
CLDN4O14493 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CLDN4O14493 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.23■□□□□ 0.35
CLDN4O14493 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CLDN4O14493 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CLDN4O14493 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CLDN4O14493 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.22■□□□□ 0.35
CLDN4O14493 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CLDN4O14493 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CLDN4O14493 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms