Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLDN5O00501 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN5O00501 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN5O00501 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
CLDN5O00501 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CLDN5O00501 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.29■□□□□ 0.68
CLDN5O00501 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN5O00501 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDN5O00501 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDN5O00501 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDN5O00501 KRT89P-201ENST00000620027 1478 ntBASIC19.28■□□□□ 0.68
CLDN5O00501 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN5O00501 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN5O00501 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN5O00501 GMCL1P1-201ENST00000463439 1581 ntBASIC19.28■□□□□ 0.68
CLDN5O00501 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN5O00501 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN5O00501 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 ATP5G2P1-201ENST00000433580 426 ntBASIC19.28■□□□□ 0.68
CLDN5O00501 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN5O00501 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.28■□□□□ 0.68
CLDN5O00501 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN5O00501 VPS72-207ENST00000640458 689 ntTSL 5 BASIC19.28■□□□□ 0.68
CLDN5O00501 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
CLDN5O00501 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 AL353692.3-201ENST00000407031 1396 ntBASIC19.28■□□□□ 0.68
CLDN5O00501 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDN5O00501 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CLDN5O00501 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDN5O00501 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDN5O00501 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
CLDN5O00501 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CLDN5O00501 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDN5O00501 HCG4P8-203ENST00000443049 980 ntBASIC19.27■□□□□ 0.68
CLDN5O00501 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.68
CLDN5O00501 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.27■□□□□ 0.68
CLDN5O00501 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN5O00501 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN5O00501 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CLDN5O00501 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CLDN5O00501 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CLDN5O00501 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDN5O00501 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.27■□□□□ 0.68
CLDN5O00501 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
CLDN5O00501 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN5O00501 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN5O00501 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN5O00501 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CLDN5O00501 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
CLDN5O00501 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.27■□□□□ 0.67
CLDN5O00501 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
CLDN5O00501 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN5O00501 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN5O00501 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDN5O00501 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CLDN5O00501 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms