Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 AC093503.3-201ENST00000624917 2352 ntBASIC16.69■□□□□ 0.26
NPIPA3F8WFD2 CROCCP3-202ENST00000420820 1947 ntBASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NPIPA3F8WFD2 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 MTMR9LP-203ENST00000426597 1545 ntBASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 MIR662-201ENST00000384847 95 ntBASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 KRT8P26-201ENST00000534154 1276 ntBASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 ANO7L1-203ENST00000602586 1720 ntBASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NPIPA3F8WFD2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 AL357033.4-201ENST00000617703 1807 ntBASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NPIPA3F8WFD2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms