Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 AC073195.1-201ENST00000607241 877 ntBASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 AC034236.2-201ENST00000606662 1610 ntBASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
TRIM49D1C9J1S8 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 AC012317.2-201ENST00000623305 2251 ntBASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 C1QBPP2-201ENST00000528754 825 ntBASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 AP000692.2-201ENST00000608391 879 ntBASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRIM49D1C9J1S8 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 MESTP1-201ENST00000404287 994 ntBASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
TRIM49D1C9J1S8 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRIM49D1C9J1S8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms