Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 MFAP1P1-201ENST00000442257 1255 ntBASIC19.49■□□□□ 0.71
RCCD1A6NED2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC19.49■□□□□ 0.71
RCCD1A6NED2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RCCD1A6NED2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.48■□□□□ 0.71
RCCD1A6NED2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
RCCD1A6NED2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RCCD1A6NED2 AC009102.3-201ENST00000623118 1491 ntBASIC19.48■□□□□ 0.71
RCCD1A6NED2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 KRT18P55-202ENST00000578578 1546 ntBASIC19.47■□□□□ 0.71
RCCD1A6NED2 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 MIR3180-5-201ENST00000583743 153 ntBASIC19.47■□□□□ 0.71
RCCD1A6NED2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.47■□□□□ 0.71
RCCD1A6NED2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RCCD1A6NED2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 AC022211.2-201ENST00000585075 2527 ntBASIC19.46■□□□□ 0.71
RCCD1A6NED2 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 SLC25A1P4-201ENST00000567977 778 ntBASIC19.46■□□□□ 0.71
RCCD1A6NED2 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RCCD1A6NED2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RCCD1A6NED2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RCCD1A6NED2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RCCD1A6NED2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms