Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 ESPNP-201ENST00000270691 2015 ntBASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.56■■□□□ 1.04
PTPDC1A2A3K4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 SPDYE15P-201ENST00000424157 909 ntBASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 IER3-202ENST00000376377 1350 ntBASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PTPDC1A2A3K4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 AC024243.1-201ENST00000609234 778 ntBASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 AC005332.1-201ENST00000577698 1310 ntBASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.54■■□□□ 1.04
PTPDC1A2A3K4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 NMU-205ENST00000511469 756 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC083849.1-201ENST00000615227 514 ntBASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC093677.2-201ENST00000600169 1863 ntBASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 LINC01311-201ENST00000565162 1445 ntBASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PTPDC1A2A3K4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.52■■□□□ 1.04
PTPDC1A2A3K4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPDC1A2A3K4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.52■■□□□ 1.04
PTPDC1A2A3K4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
PTPDC1A2A3K4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PTPDC1A2A3K4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms