Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 ITM2C-210ENST00000620962 501 ntBASIC18.37■□□□□ 0.53
CCDC189A1A4V9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCDC189A1A4V9 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 AL359736.2-201ENST00000621992 437 ntBASIC18.36■□□□□ 0.53
CCDC189A1A4V9 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.36■□□□□ 0.53
CCDC189A1A4V9 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 AL499627.1-201ENST00000569373 2188 ntBASIC18.35■□□□□ 0.53
CCDC189A1A4V9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 AL357033.4-201ENST00000617703 1807 ntBASIC18.35■□□□□ 0.53
CCDC189A1A4V9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 AC008040.2-201ENST00000461049 708 ntBASIC18.35■□□□□ 0.53
CCDC189A1A4V9 AC011506.1-201ENST00000474329 610 ntBASIC18.35■□□□□ 0.53
CCDC189A1A4V9 CA15P1-201ENST00000481698 905 ntBASIC18.35■□□□□ 0.53
CCDC189A1A4V9 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCDC189A1A4V9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC189A1A4V9 AP000593.1-201ENST00000393668 712 ntBASIC18.34■□□□□ 0.53
CCDC189A1A4V9 FAM201B-201ENST00000458407 597 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms