Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 MIR564-202ENST00000385049 94 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 CKBP1-201ENST00000565489 1086 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 MTDHP1-201ENST00000605323 784 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 IKBKGP1-201ENST00000612193 1073 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 AC133041.1-202ENST00000642053 222 ntBASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC12.97□□□□□ -0.33
TRBV27A0A0K0K1C4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 AC091390.4-202ENST00000476426 537 ntBASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 UNC93B5-201ENST00000530315 699 ntBASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC12.96□□□□□ -0.33
TRBV27A0A0K0K1C4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 AD000864.1-201ENST00000624076 2295 ntBASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 AC080080.1-201ENST00000625121 2420 ntBASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
TRBV27A0A0K0K1C4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 AC034236.2-201ENST00000606662 1610 ntBASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 AC004951.3-201ENST00000418645 1148 ntBASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 NIFKP9-201ENST00000419265 221 ntBASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 AC098934.4-201ENST00000564127 592 ntBASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV27A0A0K0K1C4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms