Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AC126763.1-201ENST00000552015 2118 ntBASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-6A0A0B4J262 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-6A0A0B4J262 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 MMAB-206ENST00000540016 945 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 TFP1-202ENST00000475455 1573 ntBASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 AC092850.2-201ENST00000623821 2697 ntBASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 PCDH8P1-201ENST00000428983 2773 ntBASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-6A0A0B4J262 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms