Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC141586.5-201ENST00000624546 2050 ntBASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 RPS2P55-201ENST00000397318 883 ntBASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC107956.1-201ENST00000494359 873 ntBASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV5-3A0A0A0MS03 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 AP003041.3-201ENST00000527151 707 ntBASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 MIR3180-4-201ENST00000582223 153 ntBASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV5-3A0A0A0MS03 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC012618.2-201ENST00000428058 849 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 DUTP2-201ENST00000519164 463 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC104390.1-201ENST00000555663 520 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AL353719.1-201ENST00000566847 864 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 AC233702.5-201ENST00000584107 538 ntBASIC17.13■□□□□ 0.33
TRBV5-3A0A0A0MS03 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms