Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 AC004408.2-201ENST00000623613 2777 ntBASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 TNXA-203ENST00000507684 2038 ntBASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 AL160237.2-201ENST00000556165 472 ntBASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSNK1G3Q9Y6M4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 AC026471.1-201ENST00000564629 3026 ntBASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 AC099336.1-202ENST00000602961 463 ntBASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 AC104692.2-201ENST00000603054 253 ntBASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 AC083906.6-201ENST00000641366 219 ntBASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CSNK1G3Q9Y6M4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 LINC00167-201ENST00000530583 1419 ntBASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 KRT16P4-201ENST00000453883 522 ntBASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 AL031008.1-201ENST00000619963 541 ntBASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSNK1G3Q9Y6M4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms