Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 KRT8P7-201ENST00000533003 1432 ntBASIC20.95■□□□□ 0.94
CLIC4Q9Y696 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLIC4Q9Y696 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 AC010653.2-201ENST00000623505 997 ntBASIC20.94■□□□□ 0.94
CLIC4Q9Y696 AC112497.1-201ENST00000624824 639 ntBASIC20.94■□□□□ 0.94
CLIC4Q9Y696 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLIC4Q9Y696 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 AC104390.1-201ENST00000555663 520 ntBASIC20.93■□□□□ 0.94
CLIC4Q9Y696 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 FLJ13224-201ENST00000313737 1514 ntBASIC20.93■□□□□ 0.94
CLIC4Q9Y696 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.93■□□□□ 0.94
CLIC4Q9Y696 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.92■□□□□ 0.94
CLIC4Q9Y696 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.92■□□□□ 0.94
CLIC4Q9Y696 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLIC4Q9Y696 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms