Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 TSPY23P-201ENST00000440136 739 ntBASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AC098590.1-201ENST00000468126 897 ntBASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 AP001094.4-201ENST00000579008 2176 ntBASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB1Q9Y5G3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 AC006116.8-202ENST00000587620 1550 ntBASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB1Q9Y5G3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AL158047.1-201ENST00000445918 881 ntBASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AC060766.5-201ENST00000590539 871 ntBASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 AL023806.1-201ENST00000603994 1649 ntBASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB1Q9Y5G3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms