Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 AC008687.5-201ENST00000593746 558 ntBASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LINC00588Q9Y4M8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AL450487.1-201ENST00000426799 995 ntBASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 TOB2P1-201ENST00000469761 992 ntBASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AP000867.3-201ENST00000524675 377 ntBASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AC004263.2-201ENST00000617183 678 ntBASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AC124864.1-201ENST00000623408 392 ntBASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 AC005082.1-201ENST00000413042 2259 ntBASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00588Q9Y4M8 HCG11-201ENST00000411553 5696 ntBASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 ADK-206ENST00000541550 2222 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 AL592071.1-201ENST00000611956 408 ntBASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00588Q9Y4M8 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms