Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 AC006116.8-202ENST00000587620 1550 ntBASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRCH1Q9Y2L9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
LRCH1Q9Y2L9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
LRCH1Q9Y2L9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
LRCH1Q9Y2L9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 CROCCP5-201ENST00000436658 830 ntBASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 TERF1P5-201ENST00000477545 1207 ntBASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
LRCH1Q9Y2L9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 AC005181.1-201ENST00000604782 1256 ntBASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRCH1Q9Y2L9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 AC007322.4-201ENST00000509611 723 ntBASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.43■□□□□ 0.38
LRCH1Q9Y2L9 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms