Protein–RNA interactions for Protein: Q9Y234

LIPT1, Lipoyltransferase 1, mitochondrial, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIPT1Q9Y234 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 MIR1238-201ENST00000408483 83 ntBASIC17.11■□□□□ 0.33
LIPT1Q9Y234 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 CR769767.2-201ENST00000622735 460 ntBASIC17.11■□□□□ 0.33
LIPT1Q9Y234 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LIPT1Q9Y234 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 SLC25A6P5-201ENST00000435663 894 ntBASIC17.1■□□□□ 0.33
LIPT1Q9Y234 AC007663.1-201ENST00000438948 1240 ntBASIC17.1■□□□□ 0.33
LIPT1Q9Y234 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.1■□□□□ 0.33
LIPT1Q9Y234 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 MIR3180-4-201ENST00000582223 153 ntBASIC17.1■□□□□ 0.33
LIPT1Q9Y234 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
LIPT1Q9Y234 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 AC068880.1-201ENST00000507289 2297 ntBASIC17.09■□□□□ 0.33
LIPT1Q9Y234 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 TSPY14P-201ENST00000303979 915 ntBASIC17.09■□□□□ 0.33
LIPT1Q9Y234 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LIPT1Q9Y234 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 AC138028.4-201ENST00000564984 1845 ntBASIC17.08■□□□□ 0.33
LIPT1Q9Y234 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
LIPT1Q9Y234 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LIPT1Q9Y234 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LIPT1Q9Y234 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LIPT1Q9Y234 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms