Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.92■■□□□ 1.42
SPG7Q9UQ90 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 USP39-202ENST00000409025 1946 ntTSL 5 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 PMS2P1-201ENST00000431037 1228 ntBASIC23.91■■□□□ 1.42
SPG7Q9UQ90 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 AL355877.3-201ENST00000622820 899 ntBASIC23.91■■□□□ 1.42
SPG7Q9UQ90 AC099343.3-201ENST00000605834 2503 ntBASIC23.91■■□□□ 1.42
SPG7Q9UQ90 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 AIRN-201ENST00000601203 4374 ntBASIC23.91■■□□□ 1.42
SPG7Q9UQ90 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
SPG7Q9UQ90 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 AC009533.2-201ENST00000543664 586 ntBASIC23.9■■□□□ 1.42
SPG7Q9UQ90 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 ABBA01031661.1-201ENST00000634362 1253 ntBASIC23.9■■□□□ 1.42
SPG7Q9UQ90 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SPG7Q9UQ90 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.89■■□□□ 1.42
SPG7Q9UQ90 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SPG7Q9UQ90 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SPG7Q9UQ90 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SPG7Q9UQ90 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
SPG7Q9UQ90 MIR574-201ENST00000385209 96 ntBASIC23.89■■□□□ 1.41
SPG7Q9UQ90 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
SPG7Q9UQ90 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 RBM17P3-201ENST00000417687 1192 ntBASIC23.88■■□□□ 1.41
SPG7Q9UQ90 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 DANCR-204ENST00000444958 709 ntTSL 3 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 MTCL1P1-201ENST00000446207 792 ntBASIC23.88■■□□□ 1.41
SPG7Q9UQ90 AC018712.1-201ENST00000455767 687 ntBASIC23.88■■□□□ 1.41
SPG7Q9UQ90 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 AC093909.1-201ENST00000504731 1122 ntBASIC23.88■■□□□ 1.41
SPG7Q9UQ90 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 AC117500.6-201ENST00000624871 588 ntBASIC23.88■■□□□ 1.41
SPG7Q9UQ90 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
SPG7Q9UQ90 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPG7Q9UQ90 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SPG7Q9UQ90 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPG7Q9UQ90 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC23.87■■□□□ 1.41
SPG7Q9UQ90 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SPG7Q9UQ90 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms