Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 HEIH-201ENST00000623091 1652 ntBASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 AL353807.1-201ENST00000427475 662 ntBASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 POU5F1P3-201ENST00000428824 1078 ntBASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 KSR1P1-201ENST00000446298 240 ntBASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 AC073648.6-201ENST00000641589 218 ntBASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 AL139384.1-201ENST00000612143 3047 ntBASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PCDHGB4Q9UN71 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 AC134043.2-201ENST00000624206 2238 ntBASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 HTR7P1-201ENST00000538670 1336 ntBASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 AC073592.3-201ENST00000625118 1834 ntBASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 AL353708.3-201ENST00000610272 989 ntBASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 KRT8P11-201ENST00000409686 1436 ntBASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDHGB4Q9UN71 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 AC004980.1-204ENST00000429707 299 ntBASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PCDHGB4Q9UN71 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms