Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AL355385.1-201ENST00000606123 409 ntBASIC26.27■■□□□ 1.8
STAG3Q9UJ98 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC26.27■■□□□ 1.8
STAG3Q9UJ98 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 UROS-202ENST00000368778 1556 ntTSL 2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 AP001160.2-201ENST00000596071 487 ntBASIC26.26■■□□□ 1.79
STAG3Q9UJ98 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC26.26■■□□□ 1.79
STAG3Q9UJ98 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 INIP-202ENST00000374236 874 ntTSL 2 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 DHDH-204ENST00000523250 634 ntTSL 5 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 AC009154.2-201ENST00000621177 724 ntBASIC26.25■■□□□ 1.79
STAG3Q9UJ98 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
STAG3Q9UJ98 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 YBX2P1-201ENST00000394192 760 ntBASIC26.24■■□□□ 1.79
STAG3Q9UJ98 IMP4-203ENST00000409935 958 ntTSL 5 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 HNRNPA1P28-201ENST00000424481 961 ntBASIC26.24■■□□□ 1.79
STAG3Q9UJ98 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 AC083906.6-201ENST00000641366 219 ntBASIC26.24■■□□□ 1.79
STAG3Q9UJ98 AC079781.4-201ENST00000641908 219 ntBASIC26.24■■□□□ 1.79
STAG3Q9UJ98 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
STAG3Q9UJ98 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 AC125634.1-201ENST00000438758 1403 ntBASIC26.23■■□□□ 1.79
STAG3Q9UJ98 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 AC112482.1-201ENST00000492080 688 ntBASIC26.23■■□□□ 1.79
STAG3Q9UJ98 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
STAG3Q9UJ98 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
STAG3Q9UJ98 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
STAG3Q9UJ98 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
STAG3Q9UJ98 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC26.22■■□□□ 1.79
STAG3Q9UJ98 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms