Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 AC110285.5-201ENST00000611501 352 ntBASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NIPSNAP3AQ9UFN0 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 RPS2P4-201ENST00000476944 856 ntBASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 AC011298.2-201ENST00000617989 482 ntBASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.55■□□□□ 0.4
NIPSNAP3AQ9UFN0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPSNAP3AQ9UFN0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 LINC00896-202ENST00000609602 2128 ntBASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPSNAP3AQ9UFN0 KSR1P1-201ENST00000446298 240 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms