Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COMMD3Q9UBI1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 KRT8P45-201ENST00000414328 1447 ntBASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 NTF6G-201ENST00000591094 616 ntBASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 AC005837.3-201ENST00000612163 286 ntBASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 AL118508.1-201ENST00000613502 2345 ntBASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COMMD3Q9UBI1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COMMD3Q9UBI1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 AC093787.1-201ENST00000450396 207 ntBASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 AL357033.4-201ENST00000617703 1807 ntBASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COMMD3Q9UBI1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 AC137761.2-201ENST00000561729 223 ntBASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 AC145350.3-201ENST00000569033 163 ntBASIC16.13■□□□□ 0.17
COMMD3Q9UBI1 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms