Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL20A1Q9P218 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
COL20A1Q9P218 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 BNIP3P18-201ENST00000593976 575 ntBASIC20.68■□□□□ 0.9
COL20A1Q9P218 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL20A1Q9P218 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.68■□□□□ 0.9
COL20A1Q9P218 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 AC004870.1-201ENST00000315132 882 ntBASIC20.67■□□□□ 0.9
COL20A1Q9P218 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 AC079781.3-201ENST00000449110 356 ntBASIC20.67■□□□□ 0.9
COL20A1Q9P218 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 AC008687.5-201ENST00000593746 558 ntBASIC20.67■□□□□ 0.9
COL20A1Q9P218 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 AC098818.2-201ENST00000564925 2320 ntBASIC20.67■□□□□ 0.9
COL20A1Q9P218 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL20A1Q9P218 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.67■□□□□ 0.9
COL20A1Q9P218 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 AKR1C7P-201ENST00000305623 895 ntBASIC20.66■□□□□ 0.9
COL20A1Q9P218 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 NUS1P2-201ENST00000417358 873 ntBASIC20.66■□□□□ 0.9
COL20A1Q9P218 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 AC104692.2-201ENST00000603054 253 ntBASIC20.66■□□□□ 0.9
COL20A1Q9P218 AL031008.1-201ENST00000619963 541 ntBASIC20.66■□□□□ 0.9
COL20A1Q9P218 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.66■□□□□ 0.9
COL20A1Q9P218 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL20A1Q9P218 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
COL20A1Q9P218 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
COL20A1Q9P218 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms