Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 KRT8P11-201ENST00000409686 1436 ntBASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 B3GAT3P1-201ENST00000471720 806 ntBASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LIN7CQ9NUP9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 GNAS-203ENST00000306120 1878 ntBASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 AL596275.1-201ENST00000423464 877 ntBASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 REXO1L10P-201ENST00000615707 1290 ntBASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 AC011298.2-201ENST00000617989 482 ntBASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 REXO1L12P-201ENST00000622156 912 ntBASIC15.27■□□□□ 0.04
LIN7CQ9NUP9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
LIN7CQ9NUP9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 AC135776.1-201ENST00000319817 2481 ntBASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.26■□□□□ 0.03
LIN7CQ9NUP9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms