Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS45Q9NRW7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS45Q9NRW7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS45Q9NRW7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS45Q9NRW7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 MIR4674-201ENST00000582457 87 ntBASIC18.91■□□□□ 0.62
VPS45Q9NRW7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
VPS45Q9NRW7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 NEFHP1-201ENST00000412845 2629 ntBASIC18.9■□□□□ 0.62
VPS45Q9NRW7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 UNC93B7-201ENST00000509439 705 ntBASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AC011498.5-201ENST00000592027 486 ntBASIC18.9■□□□□ 0.62
VPS45Q9NRW7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AC006538.3-201ENST00000612495 578 ntBASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AC023511.2-201ENST00000618803 211 ntBASIC18.9■□□□□ 0.62
VPS45Q9NRW7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
VPS45Q9NRW7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
VPS45Q9NRW7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
VPS45Q9NRW7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 AC073592.3-201ENST00000625118 1834 ntBASIC18.89■□□□□ 0.61
VPS45Q9NRW7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 AC034236.2-201ENST00000606662 1610 ntBASIC18.89■□□□□ 0.61
VPS45Q9NRW7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.89■□□□□ 0.61
VPS45Q9NRW7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.88■□□□□ 0.61
VPS45Q9NRW7 NUS1P1-201ENST00000446295 882 ntBASIC18.88■□□□□ 0.61
VPS45Q9NRW7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms