Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 KRT16P1-201ENST00000399124 1418 ntBASIC16.61■□□□□ 0.25
HINT3Q9NQE9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HINT3Q9NQE9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 AC026471.5-201ENST00000615068 467 ntBASIC16.6■□□□□ 0.25
HINT3Q9NQE9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.6■□□□□ 0.25
HINT3Q9NQE9 FLJ13224-201ENST00000313737 1514 ntBASIC16.6■□□□□ 0.25
HINT3Q9NQE9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 BCL2-203ENST00000589955 5011 ntBASIC16.59■□□□□ 0.25
HINT3Q9NQE9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HINT3Q9NQE9 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
HINT3Q9NQE9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 AC026271.3-201ENST00000571884 352 ntBASIC16.58■□□□□ 0.24
HINT3Q9NQE9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 AC008622.2-201ENST00000617006 1229 ntBASIC16.58■□□□□ 0.24
HINT3Q9NQE9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HINT3Q9NQE9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 AL096828.2-201ENST00000567259 1965 ntBASIC16.57■□□□□ 0.24
HINT3Q9NQE9 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
HINT3Q9NQE9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms