Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RTN4Q9NQC3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC21.64■■□□□ 1.06
RTN4Q9NQC3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
RTN4Q9NQC3 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.06
RTN4Q9NQC3 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RTN4Q9NQC3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RTN4Q9NQC3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 AC137761.2-201ENST00000561729 223 ntBASIC21.63■■□□□ 1.05
RTN4Q9NQC3 AC145350.3-201ENST00000569033 163 ntBASIC21.63■■□□□ 1.05
RTN4Q9NQC3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 CYP2T3P-201ENST00000601990 817 ntBASIC21.63■■□□□ 1.05
RTN4Q9NQC3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 LINC02228-204ENST00000642115 2962 ntBASIC21.63■■□□□ 1.05
RTN4Q9NQC3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC21.63■■□□□ 1.05
RTN4Q9NQC3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 AC010740.1-201ENST00000417035 684 ntBASIC21.62■■□□□ 1.05
RTN4Q9NQC3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 MIR6821-201ENST00000617625 74 ntBASIC21.62■■□□□ 1.05
RTN4Q9NQC3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 PHGDH-210ENST00000641115 1638 ntBASIC21.62■■□□□ 1.05
RTN4Q9NQC3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RTN4Q9NQC3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RTN4Q9NQC3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms