Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 LINC00602-201ENST00000629776 2065 ntBASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CSNK1G1Q9HCP0 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC093677.2-201ENST00000600169 1863 ntBASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC009154.2-201ENST00000621177 724 ntBASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC124864.1-201ENST00000623408 392 ntBASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC090164.3-201ENST00000610780 2143 ntBASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 AC093010.1-201ENST00000473625 1624 ntBASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CSNK1G1Q9HCP0 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 AC132938.6-201ENST00000623828 1655 ntBASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 TSPY12P-201ENST00000421279 868 ntBASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 AL845331.1-201ENST00000424978 1190 ntBASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 KRT18P56-201ENST00000507275 550 ntBASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CSNK1G1Q9HCP0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms