Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 AC005593.1-201ENST00000624894 515 ntBASIC16.97■□□□□ 0.31
CHD8Q9HCK8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHD8Q9HCK8 KRT19P2-202ENST00000557173 1012 ntBASIC16.96■□□□□ 0.31
CHD8Q9HCK8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 LINC02560-201ENST00000596379 459 ntBASIC16.96■□□□□ 0.31
CHD8Q9HCK8 AC116407.2-201ENST00000613639 860 ntBASIC16.96■□□□□ 0.31
CHD8Q9HCK8 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 AL357033.4-201ENST00000617703 1807 ntBASIC16.96■□□□□ 0.31
CHD8Q9HCK8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CHD8Q9HCK8 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.3
CHD8Q9HCK8 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.96■□□□□ 0.3
CHD8Q9HCK8 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.96■□□□□ 0.3
CHD8Q9HCK8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 AL596325.1-201ENST00000563991 1082 ntBASIC16.95■□□□□ 0.3
CHD8Q9HCK8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 AL589182.2-201ENST00000619332 1049 ntBASIC16.95■□□□□ 0.3
CHD8Q9HCK8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.95■□□□□ 0.3
CHD8Q9HCK8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 FAM58CP-201ENST00000435741 640 ntBASIC16.94■□□□□ 0.3
CHD8Q9HCK8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 SIGLEC16-201ENST00000599858 1437 ntBASIC16.94■□□□□ 0.3
CHD8Q9HCK8 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CHD8Q9HCK8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CHD8Q9HCK8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms