Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.32■■□□□ 1
EFCC1Q9HA90 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.32■■□□□ 1
EFCC1Q9HA90 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
EFCC1Q9HA90 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.31■■□□□ 1
EFCC1Q9HA90 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.31■■□□□ 1
EFCC1Q9HA90 AC091607.1-201ENST00000490318 1060 ntBASIC21.31■■□□□ 1
EFCC1Q9HA90 AL049840.3-201ENST00000602669 611 ntBASIC21.31■■□□□ 1
EFCC1Q9HA90 AC140113.2-201ENST00000604370 208 ntBASIC21.31■■□□□ 1
EFCC1Q9HA90 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.31■■□□□ 1
EFCC1Q9HA90 KRT8P32-201ENST00000512863 1461 ntBASIC21.31■■□□□ 1
EFCC1Q9HA90 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.31■■□□□ 1
EFCC1Q9HA90 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 AC020916.1-201ENST00000587762 1774 ntBASIC21.31■■□□□ 1
EFCC1Q9HA90 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
EFCC1Q9HA90 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
EFCC1Q9HA90 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC21.3■■□□□ 1
EFCC1Q9HA90 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.3■■□□□ 1
EFCC1Q9HA90 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.3■■□□□ 1
EFCC1Q9HA90 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.3■■□□□ 1
EFCC1Q9HA90 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
EFCC1Q9HA90 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
EFCC1Q9HA90 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
EFCC1Q9HA90 AC006333.2-201ENST00000607957 2099 ntBASIC21.3■■□□□ 1
EFCC1Q9HA90 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.3■■□□□ 1
EFCC1Q9HA90 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC21.29■■□□□ 1
EFCC1Q9HA90 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.29■■□□□ 1
EFCC1Q9HA90 AC018712.1-201ENST00000455767 687 ntBASIC21.29■■□□□ 1
EFCC1Q9HA90 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 AC027796.2-201ENST00000575326 344 ntBASIC21.29■■□□□ 1
EFCC1Q9HA90 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
EFCC1Q9HA90 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 MIR7706-201ENST00000613747 67 ntBASIC21.29■■□□□ 1
EFCC1Q9HA90 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
EFCC1Q9HA90 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.29■■□□□ 1
EFCC1Q9HA90 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.29■■□□□ 1
EFCC1Q9HA90 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
EFCC1Q9HA90 AFG3L1P-217ENST00000557444 2447 ntBASIC21.28■■□□□ 1
EFCC1Q9HA90 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.28■■□□□ 1
EFCC1Q9HA90 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.28■■□□□ 1
EFCC1Q9HA90 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms